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Tuesday 26 March 2013

Gene Therapy - The Walton



Here is a copy of the article I did for the Spring Edition of The Walton. You can read more here.

Over the past year in Ireland, there has been much excitement with regards to gene therapy, with a couple of potentially ground-breaking developments occurring. So let’s pause and look at what gene therapy is, how it is currently being used and perhaps look towards the future.

Gene Therapy is an umbrella term for many types of treatments. Ultimately it involves changing, fixing or replacing genes that are defective or mutated in someone’s cell such that the cells can function again. Remember that genes represent the code by which just about everything that happens in the body follows; an instruction manual for all the processes of the body. So if some of that code is missing, or incorrect, the body functions won’t work properly. Examples of such diseases would be cystic fibrosis, Huntington’s disease, Sickle-cell anaemia and a huge range of immunity disorders. Even cancer is caused by genetic mutations. So if there was a way to fix the code, repair it in some way, this would have huge benefits to thousands of people.

One way to fix a broken code involves using viruses. This may sound alarming, but it is actually quite effectively used. The basic principal revolves around using a harmless virus i.e. one that will only infect certain cells and won’t replicate, to carry the corrected gene code to cells. Viruses do this anyway – when they infect a person, they are often actually infecting the cells, their own gene codes being incorporated into the host cell. Usually this is extremely detrimental, and cell death ensues, but by controlling what gene sequences are included in the virus, you can potentially tailor what happens when a virus infects a cell.



The diagram shown here shows a virus (called a vector because it is basically a transport vehicle) attaching to a cell. It is an adenovirus vector. Adenovirus is associated with respiratory, intestinal, and eye infections in humans (especially the common cold). As shown in the diagram, the virus is taken into the cell and then travels to the nucleus (the pink thing). It attaches to the surface of the nucleus and injects the DNA into to core of the nucleus. Remember that the nucleus of the cell is where we hold all our own genetic material.
The DNA type molecule in this case isn’t a double-stranded molecule, but instead is a single strand, and can thus be read by the cells replication molecules. These molecules are called messenger RNA, and they are part of the process by which new proteins are formed. Thus, if the correct DNA is present, the correct proteins will be made, and so any dysfunction that occurred before may be rectified.

There are two methods to introduce the genetic material into the patient. Ex vivo gene therapy involves removing cells from an individual’s body, modifying them to include the correct genetic material using a vector, and then transferring these cells back into the patient’s body. In Vivo gene therapy involves injecting the viral vector directly into the patient, in the hopes that the virus with infect and ‘fix’ the damaged cells. Both methods have seen varying levels of success.

Cystic fibrosis is a genetic disease which is particularly common in Ireland and results in a build-up of mucous in the lungs of affected individuals. Vital research in University College Cork is currently underway to cure cystic fibrosis. The central tenet to this research involves creating breaks in both strands of the DNA at targeted sites. This process is enabled by the use of Zinc-finger nucleases which are specially designed DNA-binding proteins, with high specificity.

By intentionally creating a break in the DNA strands, you can induce homologous recombination (a time of genetic repair) between the broken strands. This can allow you to include the correct sequence in the genome at that point. More in-depth analysis of the current status of research, both here and in the UK will be presented in next issue of Walton Magazine.

Similarly, a novel treatment for bacterial infection of Pseudomonas aeruginosa in cystic fibrosis patients is also seeing some success, also using gene therapy. The research was carried out the Alimentary Pharmabiotic Centre [APC], a Science Foundation Ireland funded research centre based in UCC, Teagasc Moorepark Research Centre and CIT.

The researchers, led by Professor Colin Hill in UCC and Professor Paul Ross in Teagasc, took advantage of a method called phage therapy. This involves identifying and characterising bacterial viruses which can attack and kill Pseudomonas aeruginosa within minutes of initial contact. One of the advantages of phage therapy is that any viruses which ‘find’ a target multiply at the target site, generating more viruses and amplifying the therapeutic effect. This research is paving the way for the development of new treatments for Pseudomonas infections in cystic fibrosis patients.

So with two keen and different ways of tackling the disease, either by treating the infections that occur or by curing the disease itself, it goes without saying that there is bound to be some new revelation this year. We have barely scratched the iceberg in this article with all research for other diseases that could be treated, so maybe that’s for the next time!